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PDBsum entry 1qty

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1qty calculated with MOLE 2.0 PDB id
1qty
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 1.44 33.5 -0.48 -0.19 15.8 77 4 4 2 3 3 0 1  
2 1.24 1.34 75.2 -1.00 -0.22 19.4 79 6 4 1 5 2 1 1  
3 1.48 1.66 29.8 -0.88 -0.17 13.8 71 4 3 1 3 2 2 1  
4 1.43 1.49 29.5 -0.67 -0.08 11.7 70 5 3 1 4 2 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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