PDBsum entry 1qtm Go to PDB code:  Tunnel analysis for: 1qtm calculated with MOLE 2.0 PDB id 1qtm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.38 37.6 -1.69 -0.34 26.7 79 5 4 3 6 1 1 0  TTP 113 A MG 1002 A DC 111 B 2DT 112 B 2 1.31 1.38 41.5 -1.96 -0.42 27.8 82 6 4 2 5 2 0 0  TTP 113 A DG 110 B DC 111 B 2DT 112 B DA 204 C DA 205 C 3 1.66 1.66 15.3 -1.49 -0.61 20.4 85 2 1 1 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.