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PDBsum entry 1qrh

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Top Page protein dna_rna tunnels links
Tunnel analysis for: 1qrh calculated with MOLE 2.0 PDB id
1qrh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.40 4.5 2.54 0.56 1.1 54 0 0 0 3 0 1 0  
2 2.29 7.6 -1.00 -0.28 7.6 81 0 1 2 0 2 0 0  
3 1.40 8.1 1.62 0.71 2.5 58 1 0 0 4 1 0 0  
4 1.40 20.6 -1.63 -0.41 18.1 72 0 1 1 1 2 0 0  
5 1.27 17.2 1.90 0.63 6.0 79 0 1 0 6 1 0 0  
6 1.27 21.7 1.45 0.66 8.6 82 0 1 1 5 1 0 0  
7 2.43 3.1 -0.44 0.35 18.9 79 0 1 0 2 1 0 0  
8 1.36 6.6 -0.21 0.07 20.8 81 1 1 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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