spacer
spacer

PDBsum entry 1qpl

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1qpl PDB id
1qpl
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3435.33 2.06 63.44 2 10.82 1 10.89 2 10 8 6 12 9 7 0 587 108[A] (52 atoms)
2 1670.62 0.00 59.24 8 9.57 2 10.30 3 5 4 1 8 6 2 0 587 308[C] (40 atoms)
3 1118.39 0.00 58.63 9 7.36 3 12.43 1 5 3 5 6 0 7 0  
4 385.17 0.00 62.01 4 3.57 9 5.87 7 1 2 4 4 0 1 0  
5 372.09 0.00 61.78 6 3.67 8 5.29 9 5 2 3 3 0 0 0  
6 361.55 0.00 82.29 1 6.84 4 0.00 10 6 3 2 3 2 1 0  
7 232.03 0.00 61.98 5 5.73 5 6.41 5 2 2 1 2 0 2 0  
8 268.73 0.00 63.07 3 5.32 6 5.62 8 3 2 2 2 0 1 0  
9 280.55 0.00 54.58 10 4.04 7 6.81 4 3 0 1 1 2 1 0  
10 268.73 0.00 61.71 7 2.29 10 5.94 6 3 2 1 2 0 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer