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PDBsum entry 1qpf

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1qpf PDB id
1qpf
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5273.86 4.20 66.64 1 12.36 1 14.36 1 10 11 15 17 10 12 0 858 308[D] (39 atoms)
2 1255.50 0.00 57.84 8 5.38 3 8.09 3 2 5 7 9 0 3 0  
3 893.53 0.00 58.60 7 9.31 2 7.36 4 3 4 1 6 7 0 0 858 108[A], B7G 109[A] (31 atoms)
4 524.39 0.00 64.14 2 5.03 4 7.30 5 4 2 1 4 1 5 0  
5 418.92 0.00 47.53 10 2.56 8 8.12 2 5 0 1 2 1 1 0  
6 303.75 0.00 60.71 4 3.04 7 5.23 8 2 2 1 2 0 3 0  
7 190.69 0.00 53.83 9 1.41 9 5.64 6 2 0 0 2 1 2 0  
8 186.05 0.00 58.75 6 3.11 6 5.41 7 3 2 2 1 0 0 0  
9 145.97 0.00 60.00 5 4.29 5 0.00 10 0 1 4 1 0 1 0  
10 155.67 0.00 62.22 3 1.33 10 4.59 9 3 1 0 2 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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