PDBsum entry 1qht

Pore analysis for: 1qht calculated with

MOLE 2.0

PDB id

1qht

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.82

2.82

26.4

-2.05

-0.35

20.2

76

3

1

2

1

3

0

0

2

2.82

2.82

27.6

-2.13

-0.36

21.0

74

3

1

2

1

3

1

0

3

1.44

1.60

33.0

-0.90

-0.11

15.3

87

2

4

1

5

2

1

0

4

2.88

3.16

35.1

-1.27

-0.23

14.7

81

4

3

3

2

3

1

0

5

2.97

3.15

36.5

-1.47

-0.27

15.8

80

4

3

3

2

3

2

0

6

1.16

1.21

49.6

0.27

0.05

10.5

88

5

2

2

9

2

0

0

7

1.49

2.05

61.1

-1.83

-0.25

28.7

70

6

4

1

1

3

2

0

8

1.22

1.52

62.7

-0.36

0.13

14.7

76

4

3

2

7

5

0

0

9

1.48

1.50

71.6

-1.90

-0.33

19.4

74

9

3

5

2

5

4

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.