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PDBsum entry 1qdw

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Signaling protein PDB id
1qdw
Contents
Protein chains
(+ 2 more) 87 a.a. *
Waters ×539
* Residue conservation analysis

References listed in PDB file
Key reference
Title The polar t1 interface is linked to conformational changes that open the voltage-Gated potassium channel.
Authors D.L.Minor, Y.F.Lin, B.C.Mobley, A.Avelar, Y.N.Jan, L.Y.Jan, J.M.Berger.
Ref. Cell, 2000, 102, 657-670. [DOI no: 10.1016/S0092-8674(00)00088-X]
PubMed id 11007484
Abstract
Kv voltage-gated potassium channels share a cytoplasmic assembly domain, T1. Recent mutagenesis of two T1 C-terminal loop residues implicates T1 in channel gating. However, structural alterations of these mutants leave open the question concerning direct involvement of T1 in gating. We find in mammalian Kv1.2 that gating depends critically on residues at complementary T1 surfaces in an unusually polar interface. An isosteric mutation in this interface causes surprisingly little structural alteration while stabilizing the closed channel and increasing the stability of T1 tetramers. Replacing T1 with a tetrameric coiled-coil destabilizes the closed channel. Together, these data suggest that structural changes involving the buried polar T1 surfaces play a key role in the conformational changes leading to channel opening.
Figure 5.
Figure 5. T1 Interface Mutations That Affect Gating Cluster into “Hot Spots” on the Interface Surface(A) Molecular surface, cutaway view of the T1 tetramer seen from the side with one subunit deleted. “Side A” and “side B” of the interface are indicated. Residues are color-coded according to their effects on channel gating. Red indicates ΔV[1/2] of ≥ |5 mV|, green indicates no significant change, and purple indicates residues intolerant to change.(B) and (C), external views of the T1 tetramer revealing the accessibility of hot spot residues from the exterior of T1.
Figure 7.
Figure 7. Cartoon of an Intact Kv ChannelThe 4-fold axis in T1 is aligned with the 4-fold axis presumed to run through the channel pore. Transmembrane segments and C-terminal domains are indicated for two subunits and colored as in Figure 1. The green hexagon represents the N-terminal inactivation ball present in some Kv channels. Only one inactivation ball is shown for clarity.
The above figures are reprinted by permission from Cell Press: Cell (2000, 102, 657-670) copyright 2000.
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