PDBsum entry 1qaj Go to PDB code:  Pore analysis for: 1qaj calculated with MOLE 2.0 PDB id 1qaj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.01 2.24 64.5 -0.95 -0.32 10.9 78 5 3 4 7 0 5 1   2 1.23 1.81 68.2 -1.08 -0.22 19.2 82 3 3 4 5 0 2 0  DT 7 D 3 1.15 2.37 91.2 0.00 -0.02 8.1 77 3 2 2 11 0 7 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.