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Ligand clusters for UniProt code P50465

Ligand clusters for P50465: Endonuclease 8 OS=Escherichia coli (strain K12) GN=nei PE=1 SV=3

6 ligand clusters
Cluster 1.
1 ligand type
2 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1q3bA  
 

Structures

PDB   Schematic diagram
1q3bA    
1q39A    
1q3cA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 1q3b(A), 1q3c(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 1q3c(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 1q3b(A), 1q3c(A).

_Ca
 
2. Metal: _CA × 1
PDB code: 1q39(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 1q3b(A), 1q3c(A).

_Ca
 
2. Metal: _CA × 1
PDB code: 1q39(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 3
PDB codes: 1q39(A), 1q3b(A), 1q3c(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 1
PDB code: 1q39(A).

 

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