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PDBsum entry 1q39

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Tunnel analysis for: 1q39 calculated with MOLE 2.0 PDB id
1q39
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.42 6.4 -0.40 0.45 2.0 74 0 0 2 0 2 0 0  
2 1.44 9.7 -0.53 0.16 2.1 80 0 0 3 0 2 0 0  
3 2.19 6.5 -0.83 -0.58 2.8 76 0 0 2 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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