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PDBsum entry 1q39

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Cleft analysis for: 1q39 PDB id
1q39
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4376.95 2.35 65.08 2 11.18 2 13.49 1 13 7 11 19 8 11 0  
2 1861.73 0.00 64.78 3 12.13 1 12.54 2 7 5 9 7 2 3 0  
3 792.28 0.00 57.93 10 7.87 4 8.30 4 3 1 6 3 2 2 0  
4 667.83 0.00 58.99 8 8.69 3 8.36 3 2 3 5 3 2 1 0  
5 595.27 0.00 60.36 7 7.87 5 7.21 5 2 0 3 4 1 1 1  
6 442.55 0.00 60.73 6 6.31 6 6.57 6 3 1 5 3 1 1 0  
7 373.36 0.00 58.49 9 4.62 8 6.03 10 4 3 1 6 0 1 0  
8 298.69 0.00 65.77 1 4.51 9 6.35 7 2 2 2 3 1 0 0  
9 285.19 0.00 62.68 4 3.46 10 6.10 9 1 1 3 5 2 0 0  
10 286.03 0.00 61.57 5 4.82 7 6.23 8 1 1 3 1 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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