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PDBsum entry 1q1m

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Cleft analysis for: 1q1m PDB id
1q1m
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1827.14 1.63 63.64 4 10.12 1 11.03 1 9 4 7 5 5 3 2 234 322[A] (30 atoms)
2 1120.50 0.00 58.88 9 7.67 5 8.75 4 5 6 7 1 1 0 0  
3 1263.09 0.00 62.26 6 8.35 2 8.93 3 8 3 5 5 1 3 0  
4 976.22 0.00 59.77 8 5.49 9 6.26 8 5 1 6 7 3 1 1  
5 607.50 0.00 63.17 5 8.30 3 6.60 6 4 3 1 4 1 0 0  
6 667.41 0.00 63.81 3 4.28 10 5.75 9 3 3 3 5 2 2 0  
7 443.81 0.00 58.51 10 6.43 7 6.48 7 1 2 3 3 2 2 1  
8 646.73 0.00 64.95 2 5.74 8 5.24 10 5 6 5 3 2 0 0  
9 350.16 0.00 65.27 1 7.18 6 9.71 2 4 0 2 1 1 1 0  
10 361.12 0.00 61.00 7 8.25 4 7.07 5 4 2 1 1 0 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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