PDBsum entry 1q12 Go to PDB code:  Pore analysis for: 1q12 calculated with MOLE 2.0 PDB id 1q12 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 4.20 36.7 -2.14 -0.43 22.0 86 3 3 5 4 1 2 0   2 1.31 4.13 39.8 -1.32 -0.22 19.8 89 6 3 7 5 0 1 0   3 1.32 4.10 42.4 -1.71 -0.29 18.3 85 5 3 7 5 1 2 0   4 1.34 4.25 46.9 -2.01 -0.50 20.9 86 3 5 6 5 1 2 0   5 1.32 4.31 47.0 -1.82 -0.52 23.2 90 4 6 6 5 0 1 0   6 1.75 3.46 51.4 -0.76 -0.14 14.8 84 5 2 5 6 3 1 0  ATP 382 C 7 1.88 2.23 52.1 -0.20 0.09 14.8 88 7 4 8 8 0 2 0   8 1.72 1.91 56.4 -0.44 -0.09 17.0 89 5 6 7 8 0 2 0   9 1.77 1.99 59.1 -0.74 -0.19 18.5 90 5 7 7 8 0 2 0   10 1.71 2.10 63.4 -1.03 -0.38 21.0 90 3 9 6 8 0 2 0   11 2.28 2.39 83.1 -1.00 -0.14 14.5 77 8 2 4 6 5 2 0  ATP 382 D 12 1.31 4.27 95.8 -2.01 -0.40 17.8 84 9 5 11 6 5 2 0   13 1.38 4.12 37.5 -1.68 -0.25 21.7 87 5 4 6 5 0 1 0   14 1.38 4.10 38.5 -1.68 -0.44 23.7 88 3 6 5 5 0 1 0   15 1.36 4.10 39.6 -1.55 -0.27 20.2 86 4 3 7 5 1 2 0   16 1.38 4.23 40.4 -1.33 -0.18 19.9 85 6 5 6 5 0 1 0   17 1.95 1.98 48.4 -0.18 0.06 15.0 90 5 2 8 8 0 2 0   18 1.72 2.09 49.1 -0.36 -0.11 17.5 90 3 5 7 8 0 2 0   19 1.84 3.47 54.3 -0.74 -0.31 12.6 83 5 1 4 6 3 1 0  ATP 382 A 20 1.36 4.24 55.7 -1.92 -0.52 22.8 87 4 7 7 5 1 2 0   21 1.77 1.99 64.5 -0.89 -0.27 18.8 89 5 7 8 8 0 2 0   22 1.81 3.44 111.9 -1.32 -0.17 17.8 76 10 2 4 5 5 3 0  ATP 382 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.