spacer
spacer

PDBsum entry 1pyw

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1pyw PDB id
1pyw
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 9945.28 1.79 64.05 5 10.73 1 19.18 1 29 29 33 40 19 18 0  
2 5554.41 0.00 65.57 3 10.37 3 11.44 2 10 13 27 22 22 8 1 ACE 0[C], PHE 1[C], VAL 2[C],
LYS 3[C], GLN 4[C], ASN 5[C], AL
A 6[C], MAA 7[C], ALA 8[C], L
EU 9[C] (68 atoms)
3 1379.95 0.00 62.08 7 10.38 2 7.89 7 6 6 5 3 2 4 0  
4 934.45 0.00 57.92 9 5.12 10 9.46 4 2 3 5 3 3 4 0  
5 904.92 0.00 65.10 4 7.14 8 7.40 8 4 5 5 5 5 0 0  
6 611.30 0.00 52.76 10 7.87 4 8.62 5 4 3 3 1 1 2 0  
7 632.81 0.00 58.48 8 7.39 7 8.04 6 1 2 7 3 1 2 0  
8 502.03 0.00 65.95 2 7.41 6 9.80 3 2 3 2 2 4 0 0  
9 429.89 0.00 66.14 1 5.91 9 6.02 10 2 3 2 5 1 1 0  
10 385.17 0.00 63.11 6 7.49 5 6.55 9 3 3 1 4 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer