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PDBsum entry 1pxx

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1pxx calculated with MOLE 2.0 PDB id
1pxx
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.56 14.4 -1.05 -0.36 16.9 87 1 1 2 4 1 0 0  
2 1.47 16.9 -1.36 -0.40 17.7 84 2 1 2 3 1 0 0  
3 1.59 15.0 -0.50 -0.07 8.9 73 1 2 1 3 1 1 0  
4 2.47 2.3 -0.01 0.16 10.9 75 0 1 0 0 1 1 0  
5 1.33 14.3 -0.28 -0.34 7.4 79 1 0 1 3 0 0 0  
6 1.32 15.7 -0.14 -0.29 6.8 79 1 0 1 4 0 1 0  
7 1.36 14.0 -0.12 -0.27 6.9 79 1 0 1 4 0 1 0  
8 1.33 15.9 0.04 -0.25 5.6 81 1 0 1 5 0 1 0  
9 1.64 8.8 0.29 0.12 4.8 89 1 0 3 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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