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PDBsum entry 1pwu

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Pore analysis for: 1pwu calculated with MOLE 2.0 PDB id
1pwu
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.82 3.19 25.0 -1.35 -0.34 20.0 78 2 4 2 3 3 1 0  GM6 1001 A
2 2.85 3.16 37.9 -2.85 -0.86 21.0 88 4 3 7 0 0 0 0  
3 1.88 2.33 50.8 -2.14 -0.61 18.2 87 4 6 10 3 0 1 0  
4 2.17 2.33 61.7 -1.03 -0.26 14.8 83 3 9 9 7 4 1 0  GM6 2001 B
5 2.96 3.26 69.1 -1.25 -0.45 13.8 89 2 7 10 7 2 1 0  GM6 2001 B
6 1.54 3.38 73.9 -2.66 -0.49 20.5 83 11 8 17 0 4 2 0  
7 2.96 3.26 74.9 -1.58 -0.43 17.4 84 6 11 13 7 2 2 0  GM6 2001 B
8 1.57 3.02 76.9 -2.88 -0.55 22.6 82 13 9 14 0 3 2 0  
9 2.43 4.13 78.5 -1.91 -0.47 24.5 81 8 11 7 6 1 1 0  
10 2.18 2.35 84.9 -1.58 -0.42 18.6 87 5 12 14 5 2 1 0  
11 2.18 2.32 88.6 -1.52 -0.51 14.4 93 3 9 16 7 2 0 0  
12 2.88 3.20 87.8 -1.32 -0.45 19.4 86 8 10 8 7 2 0 0  GM6 1001 A
13 2.51 4.12 91.9 -1.47 -0.46 16.6 83 4 11 12 8 2 2 0  GM6 2001 B
14 2.22 2.36 98.7 -1.14 -0.31 18.8 86 10 8 9 9 2 0 0  
15 2.83 3.21 101.1 -1.06 -0.42 13.2 88 4 10 13 10 3 1 0  GM6 1001 A GM6 2001 B
16 3.21 3.92 109.0 -1.57 -0.41 21.7 85 12 11 11 8 0 1 0  
17 1.88 2.33 113.5 -1.66 -0.50 16.2 87 6 13 16 9 2 1 0  
18 1.92 2.28 123.8 -2.01 -0.57 18.9 86 8 15 17 8 0 2 0  
19 3.17 3.93 140.6 -2.10 -0.61 20.5 90 8 13 16 7 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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