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PDBsum entry 1ppz
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Tunnel analysis for: 1ppz calculated with  MOLE 2.0
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PDB id
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1ppz
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.33 |
1.33 |
15.1 |
-0.20 |
-0.49 |
7.2 |
95 |
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0 |
1 |
3 |
3 |
1 |
0 |
0 |
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2 |
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1.37 |
1.66 |
16.0 |
-0.69 |
-0.47 |
2.8 |
63 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
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3 |
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1.40 |
1.51 |
16.5 |
-1.17 |
-0.55 |
10.9 |
88 |
2 |
0 |
2 |
0 |
1 |
0 |
0 |
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4 |
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1.37 |
1.66 |
17.3 |
-0.64 |
-0.50 |
2.9 |
63 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
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5 |
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1.38 |
1.63 |
17.8 |
-1.11 |
-0.57 |
10.4 |
88 |
2 |
0 |
2 |
0 |
1 |
0 |
0 |
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6 |
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1.37 |
1.66 |
19.4 |
-0.38 |
-0.27 |
2.6 |
70 |
0 |
0 |
0 |
1 |
1 |
2 |
0 |
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7 |
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1.41 |
1.46 |
19.9 |
-0.69 |
-0.31 |
8.2 |
86 |
2 |
0 |
2 |
1 |
1 |
1 |
0 |
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8 |
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1.20 |
1.21 |
17.3 |
0.02 |
-0.57 |
2.8 |
82 |
0 |
0 |
1 |
3 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program