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PDBsum entry 1ppn

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Cleft analysis for: 1ppn PDB id
1ppn
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1609.88 1.45 59.49 7 9.39 1 10.46 1 2 1 8 5 8 6 3  
2 1107.84 0.00 58.19 8 7.89 3 8.49 3 3 1 7 6 2 3 0  
3 928.55 0.00 60.53 6 6.97 4 10.27 2 3 2 4 4 3 3 2  
4 467.86 0.00 60.97 4 4.41 5 7.19 5 2 2 2 3 4 0 0  
5 354.38 0.00 61.42 3 7.93 2 8.03 4 1 1 2 2 2 1 0  
6 224.86 0.00 54.61 10 3.87 7 6.46 6 2 0 0 3 1 1 0  
7 222.75 0.00 56.18 9 3.36 8 6.32 7 1 0 2 1 2 0 0  
8 259.88 0.00 60.58 5 3.99 6 4.70 10 1 1 0 3 2 4 0  
9 205.88 0.00 68.33 1 1.42 10 5.61 8 2 0 3 3 2 0 0  
10 232.03 0.00 64.41 2 3.22 9 5.52 9 1 0 3 2 0 3 2  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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