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PDBsum entry 1ppi

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Cleft analysis for: 1ppi PDB id
1ppi
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3424.36 2.22 67.81 2 12.43 1 13.40 1 9 9 10 15 9 12 1 GLC 990[A], GLC 991[A], DAF 992[A],
BGC 993[A] (55 atoms)
2 1541.53 0.00 64.77 4 9.19 4 8.23 6 7 4 10 1 6 10 0  
3 712.55 0.00 66.44 3 10.63 2 8.89 4 4 2 2 3 1 2 0  
4 747.14 0.00 55.49 10 5.63 8 8.54 5 4 3 4 3 1 1 0  
5 964.83 0.00 61.50 6 9.66 3 9.51 3 5 1 5 3 4 4 0  
6 576.28 0.00 64.30 5 8.25 6 6.83 9 3 1 6 4 0 3 1  
7 537.05 0.00 58.00 9 7.26 7 7.75 7 2 2 3 1 1 4 0  
8 548.44 0.00 60.99 7 8.55 5 6.80 10 1 1 3 2 4 1 2  
9 635.77 0.00 58.45 8 4.03 10 10.26 2 2 2 5 4 1 4 2  
10 534.94 0.00 69.68 1 4.48 9 7.49 8 1 3 7 8 3 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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