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PDBsum entry 1pme

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Cleft analysis for: 1pme PDB id
1pme
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4372.73 1.78 60.82 9 10.12 4 14.88 1 12 9 13 17 10 7 0  
2 2452.36 0.00 67.14 3 11.20 1 11.71 2 7 5 9 16 4 4 1 SB2 1001[A] (27 atoms)
3 1585.41 0.00 70.82 1 11.03 2 9.25 4 9 6 8 8 1 3 1  
4 1191.80 0.00 68.13 2 7.22 7 7.93 6 5 2 7 8 2 3 0  
5 1276.59 0.00 65.73 6 8.30 5 8.90 5 8 3 4 10 3 0 0  
6 999.42 0.00 61.14 8 6.30 9 7.39 9 7 6 1 5 3 2 0  
7 803.25 0.00 58.34 10 6.64 8 10.57 3 4 5 1 2 1 0 0  
8 723.52 0.00 66.04 5 7.87 6 7.65 7 3 1 5 8 1 2 0  
9 533.67 0.00 66.31 4 10.65 3 7.53 8 3 1 4 2 3 2 0  
10 375.05 0.00 62.89 7 4.71 10 5.72 10 2 0 4 3 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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