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PDBsum entry 1pkg

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1pkg calculated with MOLE 2.0 PDB id
1pkg
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.90 1.95 54.5 -1.43 -0.26 18.2 84 3 4 4 4 1 2 0  
2 1.90 1.94 76.4 -0.66 -0.17 11.6 85 3 4 6 4 2 2 0  
3 1.59 1.71 129.9 -1.22 -0.37 16.2 80 7 6 5 6 2 0 0  ADP 1480 A PTR 568 B PTR 570 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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