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PDBsum entry 1pji

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Cleft analysis for: 1pji PDB id
1pji
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 10338.05 4.28 66.26 3 11.75 1 20.95 1 20 12 14 20 7 10 0 GOL 1001[A], GOL 1002[A], GOL 
1004[A] (18 atoms)
2 2416.92 0.00 60.55 6 8.17 6 11.77 2 8 3 3 7 2 3 0  
3 1053.84 0.00 76.80 1 8.95 3 9.10 3 2 3 4 8 3 5 0  
4 1066.08 0.00 60.19 7 8.19 4 7.53 5 6 1 4 5 0 3 0  
5 623.95 0.00 58.84 8 9.97 2 7.38 6 4 0 5 6 0 0 1  
6 683.44 0.00 73.08 2 8.19 5 6.62 8 7 4 3 5 1 1 0  
7 391.92 0.00 58.04 9 5.33 9 7.35 7 4 5 0 0 2 0 0  
8 323.16 0.00 65.82 4 8.11 7 8.26 4 2 1 2 3 1 1 0 GOL 1003[A] (6 atoms)
9 343.83 0.00 61.59 5 3.63 10 5.80 10 2 2 4 2 0 0 1  
10 262.41 0.00 46.83 10 5.74 8 6.37 9 2 1 1 2 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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