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PDBsum entry 1pgt

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1pgt calculated with MOLE 2.0 PDB id
1pgt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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14 tunnels, coloured by tunnel radius 23 tunnels, coloured by tunnel radius 23 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.31 17.2 0.42 0.63 13.8 80 2 1 1 6 2 0 0  
2 2.05 20.1 -2.25 -0.54 32.9 80 2 5 3 1 0 0 2  210 GTX B
3 1.30 20.4 -0.57 0.46 8.7 69 2 0 2 3 5 0 0  210 GTX A
4 2.06 21.4 -1.85 -0.54 28.4 86 1 5 4 0 0 0 2  
5 1.65 21.6 -2.47 -0.63 33.7 82 2 5 4 1 0 0 2  210 GTX B
6 1.65 22.9 -2.12 -0.63 30.1 87 1 5 5 0 0 0 2  
7 1.98 24.1 -2.58 -0.65 28.6 82 3 5 4 1 1 0 1  210 GTX A
8 1.98 24.3 -2.58 -0.67 29.2 84 2 5 5 1 1 0 1  210 GTX A
9 1.30 24.9 -0.51 0.24 10.6 78 3 0 3 3 3 0 1  210 GTX A
10 1.31 37.4 -1.23 -0.06 13.9 74 4 1 3 3 3 1 1  210 GTX A
11 1.30 38.9 -0.87 0.10 18.4 75 4 4 3 4 3 0 2  210 GTX A,210 GTX B
12 1.31 40.3 -0.65 0.12 15.9 79 3 4 4 3 3 0 2  210 GTX A
13 1.39 42.5 -1.58 -0.13 21.6 82 3 6 5 6 4 0 0  210 GTX B
14 1.41 44.0 -1.63 -0.17 22.9 83 3 6 6 6 4 0 0  210 GTX B
15 1.39 44.6 -1.57 -0.12 21.4 83 4 6 5 5 3 0 0  210 GTX A
16 1.39 44.7 -1.57 -0.13 21.8 84 3 6 6 5 3 0 0  210 GTX A
17 2.51 6.9 -2.71 -0.45 24.0 76 2 0 2 0 1 0 0  
18 2.58 8.6 -2.90 -0.26 27.3 80 2 0 2 1 1 0 0  
19 1.52 14.3 -0.91 0.05 21.2 72 1 2 0 3 2 0 0  
20 2.14 15.2 0.06 -0.09 4.5 83 0 1 3 5 0 0 0  
21 1.71 16.1 0.16 -0.08 4.4 85 0 2 3 5 0 0 0  
22 1.51 10.3 -0.27 -0.62 2.7 99 0 0 2 2 0 1 0  
23 1.60 10.8 -1.68 -0.75 19.3 90 1 2 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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