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PDBsum entry 1pgg

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1pgg PDB id
1pgg
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 29522.81 14.88 74.02 1 14.69 1 33.70 1 79 44 103 99 67 65 9 NAG 671[A], NAG 672[A], NAG 671[B],
NAG 672[B], HEM 601[A], HEM 
601[B] (126 atoms)
2 1984.50 0.00 66.56 4 9.00 4 9.37 2 9 4 11 4 6 5 0  
3 1030.64 0.00 67.09 3 8.72 5 8.12 6 1 3 8 8 3 3 0  
4 926.86 0.00 65.04 5 8.02 7 7.75 7 4 4 5 3 4 4 2  
5 903.66 0.00 64.93 6 6.97 8 7.50 9 4 4 4 3 4 4 2  
6 1027.27 0.00 70.10 2 10.21 3 7.65 8 1 3 8 10 4 3 0  
7 803.25 0.00 61.51 7 11.51 2 8.85 3 2 3 3 3 2 6 0  
8 685.97 0.00 61.46 8 8.32 6 8.42 5 2 3 2 3 2 5 0  
9 999.42 0.00 60.13 9 5.51 10 7.42 10 6 4 2 7 1 3 1  
10 917.58 0.00 58.70 10 6.56 9 8.75 4 6 2 2 4 1 3 1  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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