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PDBsum entry 1pdv

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Tunnel analysis for: 1pdv calculated with MOLE 2.0 PDB id
1pdv
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.25 12.7 -0.13 0.07 3.7 72 1 0 0 1 2 1 0  133 MSE A,134 MSE A
2 1.29 19.1 -0.20 -0.07 5.1 83 1 0 1 3 1 1 0  133 MSE A
3 2.12 9.0 -0.36 -0.05 9.9 78 0 1 1 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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