PDBsum entry 1p9u Go to PDB code:  Pore analysis for: 1p9u calculated with MOLE 2.0 PDB id 1p9u Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.71 2.71 27.9 -1.84 -0.33 19.1 78 5 2 4 1 3 0 0   2 1.29 2.75 37.9 -1.98 -0.45 22.4 79 6 3 4 1 3 0 0   3 1.62 2.12 68.8 -1.29 -0.43 10.4 86 5 2 4 2 1 0 0  SO4 2011 A SO4 2006 B 4 1.59 1.59 76.8 -1.59 -0.57 14.9 94 3 4 9 4 1 0 0  SO4 2011 A 5 1.44 1.79 120.5 -1.47 -0.65 17.4 92 6 7 10 5 0 1 1  SO4 2011 A SO4 2006 B 6 1.14 1.38 27.3 -0.96 -0.51 10.7 95 1 3 5 2 0 0 0   7 1.24 1.33 38.3 -1.46 -0.21 16.2 81 6 2 3 3 2 0 0   8 1.36 1.38 62.9 -0.67 -0.32 7.5 79 2 4 5 4 0 3 1   9 1.15 1.37 64.4 -0.07 -0.15 4.7 81 2 1 7 6 0 3 1   10 1.14 1.05 88.5 -1.38 -0.64 15.4 92 5 4 9 4 2 0 0  SO4 2001 C SO4 2002 C SO4 2005 C SO4 2016 D SO4 2023 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.