PDBsum entry 1p9s Go to PDB code:  Pore analysis for: 1p9s calculated with MOLE 2.0 PDB id 1p9s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.53 59.4 -1.83 -0.51 21.3 89 7 3 8 3 1 0 0  MSE 6 A 2 1.64 2.60 70.6 -1.49 -0.52 15.5 86 5 3 9 3 2 0 1  MSE 6 A 3 1.63 3.24 126.7 -1.01 -0.66 7.6 89 4 3 15 2 3 0 2  MSE 296 A MSE 198 B 4 1.38 1.40 217.2 -0.80 -0.28 13.4 88 7 6 13 11 4 0 1  MSE 6 A MSE 60 B MSE 81 B MSE 180 B DIO 301 B 5 1.25 1.25 204.0 -0.39 -0.19 10.8 85 5 4 7 8 5 0 2  MSE 60 B MSE 81 B MSE 180 B DIO 301 B 6 1.20 1.25 254.3 -0.60 -0.40 8.8 90 6 6 17 9 4 0 2  MSE 296 A MSE 60 B MSE 81 B MSE 180 B MSE 198 B D IO 301 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.