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PDBsum entry 1p47
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Tunnel analysis for: 1p47 calculated with  MOLE 2.0
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PDB id
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1p47
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.56 |
1.56 |
15.5 |
-2.79 |
-0.40 |
31.3 |
75 |
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3 |
2 |
0 |
0 |
1 |
0 |
0 |
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DC 14 C DA 49 D DC 50 D
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2 |
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1.49 |
1.51 |
16.7 |
-1.57 |
-0.48 |
21.6 |
82 |
2 |
1 |
0 |
0 |
1 |
0 |
0 |
DT 7 C DC 55 D DC 56 D DC 57 D DA 58 D
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3 |
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1.35 |
1.39 |
18.2 |
-2.29 |
-0.79 |
26.9 |
91 |
3 |
1 |
1 |
0 |
0 |
0 |
0 |
DT 7 C DC 56 D DC 57 D DA 58 D
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4 |
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1.33 |
1.44 |
24.7 |
-2.72 |
-0.73 |
33.9 |
88 |
4 |
1 |
1 |
0 |
0 |
0 |
0 |
DT 7 C DC 56 D DC 57 D DA 58 D
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5 |
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1.29 |
1.59 |
15.4 |
-1.06 |
-0.56 |
14.9 |
89 |
3 |
1 |
0 |
1 |
0 |
0 |
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DC 5 C
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6 |
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1.11 |
1.23 |
34.9 |
-1.21 |
-0.57 |
16.2 |
83 |
5 |
1 |
1 |
1 |
1 |
0 |
0 |
DT 7 C DG 8 C DG 9 C DG 10 C DC 11 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program