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PDBsum entry 1p34
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Pore analysis for: 1p34 calculated with  MOLE 2.0
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PDB id
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1p34
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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27 pores,
coloured by radius |
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27 pores,
coloured by radius
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27 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.63 |
1.97 |
31.7 |
-1.17 |
-0.37 |
17.8 |
79 |
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6 |
0 |
0 |
5 |
0 |
2 |
0 |
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DC 69 I DT 142 I DT 143 I DA 219 J DT 220 J
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2 |
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2.90 |
3.11 |
32.3 |
-1.75 |
-0.64 |
17.4 |
93 |
4 |
0 |
6 |
1 |
1 |
0 |
0 |
DA 42 I DA 43 I DT 45 I DC 49 I DT 123 I DA 248 J
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3 |
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3.43 |
3.61 |
33.5 |
-2.76 |
-0.60 |
33.0 |
75 |
4 |
1 |
0 |
0 |
0 |
0 |
0 |
DA 7 I DT 8 I DC 9 I DC 10 I DA 11 I DC 12 I DC
13 I DT 14 I DC 84 I DG 205 J DC 206 J DG 277 J
DC 278 J DG 280 J DG 281 J DT 282 J
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4 |
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3.43 |
3.62 |
33.9 |
-2.14 |
-0.68 |
24.3 |
86 |
5 |
1 |
3 |
1 |
0 |
0 |
0 |
DC 10 I DA 11 I DC 12 I DC 13 I DT 14 I DG 18 I
DT 92 I DG 277 J DC 278 J DA 279 J DG 280 J
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5 |
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3.41 |
3.60 |
38.4 |
-1.48 |
-0.68 |
17.3 |
74 |
4 |
0 |
0 |
0 |
0 |
0 |
0 |
DC 10 I DA 11 I DC 12 I DC 13 I DT 14 I DC 16 I
DT 92 I DT 93 I DG 205 J DC 206 J DG 277 J DC 278
J DG 280 J DG 281 J
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6 |
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3.58 |
3.58 |
39.8 |
-1.40 |
-0.78 |
13.3 |
96 |
3 |
1 |
6 |
1 |
0 |
0 |
0 |
DC 49 I DT 123 I DA 133 I DG 134 I DT 142 I DT
143 I DC 155 J DC 156 J DG 164 J DT 239 J
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7 |
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3.22 |
3.22 |
39.9 |
-1.75 |
-0.53 |
22.1 |
86 |
7 |
3 |
4 |
4 |
0 |
0 |
0 |
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8 |
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3.73 |
3.77 |
43.1 |
-1.47 |
-0.76 |
16.5 |
96 |
3 |
1 |
4 |
1 |
0 |
0 |
0 |
DC 49 I DG 59 I DT 123 I DA 124 I DG 134 I DG 135
I DA 153 J DG 164 J DT 239 J
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9 |
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2.04 |
2.37 |
43.5 |
-2.00 |
-0.47 |
18.2 |
80 |
3 |
2 |
3 |
1 |
0 |
1 |
0 |
DC 10 I DA 11 I DC 12 I DC 13 I DT 14 I DG 277 J
DC 278 J DG 280 J
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10 |
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1.39 |
1.46 |
45.1 |
-1.19 |
-0.37 |
17.2 |
77 |
5 |
0 |
0 |
3 |
0 |
2 |
0 |
DT 65 I DC 66 I DA 67 I DG 68 I DC 69 I DT 146 I
DA 219 J DT 220 J DG 227 J DA 228 J
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11 |
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2.00 |
2.00 |
45.2 |
-2.42 |
-0.61 |
25.1 |
74 |
4 |
2 |
1 |
0 |
1 |
1 |
0 |
DG 59 I DC 60 I DA 61 I DT 62 I DG 63 I DG 135 I
DA 153 J DC 230 J DA 231 J DC 235 J
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12 |
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3.45 |
3.45 |
49.2 |
-2.97 |
-0.52 |
35.9 |
79 |
9 |
0 |
0 |
0 |
0 |
0 |
0 |
DG 39 I DG 40 I DA 42 I DA 43 I DA 110 I DA 111 I
DT 112 I DA 113 I DC 114 I DA 115 I DC 116 I DA
174 J DA 175 J DA 176 J DT 178 J DT 180 J DA 248
J DG 249 J DT 250 J
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13 |
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1.85 |
2.04 |
51.7 |
-1.25 |
-0.47 |
11.9 |
80 |
3 |
2 |
3 |
2 |
0 |
2 |
0 |
DT 8 I DC 9 I DC 10 I DA 73 I DG 216 J DT 288 J
DT 289 J
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14 |
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3.77 |
3.88 |
54.2 |
-2.10 |
-0.68 |
23.6 |
90 |
4 |
2 |
4 |
1 |
0 |
0 |
0 |
DA 7 I DT 8 I DC 9 I DC 10 I DG 18 I DC 84 I DT
92 I DC 195 J DG 205 J DC 206 J DA 279 J DG 280 J
DG 281 J DT 282 J
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15 |
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1.95 |
1.95 |
55.4 |
-1.35 |
-0.73 |
15.9 |
91 |
3 |
1 |
4 |
2 |
0 |
0 |
0 |
DC 49 I DG 59 I DC 60 I DA 61 I DT 62 I DT 123 I
DA 124 I DG 134 I DG 164 J DC 235 J DT 236 J DT
237 J DT 238 J DT 239 J
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16 |
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1.85 |
2.26 |
61.1 |
-1.67 |
-0.52 |
18.2 |
78 |
7 |
0 |
1 |
2 |
0 |
2 |
0 |
DT 8 I DC 9 I DC 10 I DA 11 I DC 12 I DC 13 I DT
14 I DG 216 J DG 277 J DC 278 J DG 280 J DT 288 J
DT 289 J
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17 |
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2.91 |
3.11 |
61.3 |
-2.20 |
-0.58 |
25.4 |
89 |
9 |
0 |
5 |
1 |
1 |
0 |
0 |
DG 39 I DG 40 I DC 49 I DA 110 I DA 111 I DT 112
I DA 113 I DC 114 I DA 115 I DC 116 I DT 123 I DA
174 J DA 175 J DA 176 J DT 178 J DT 180 J DA 248
J DG 249 J DT 250 J
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18 |
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2.27 |
2.34 |
66.0 |
-2.03 |
-0.44 |
22.0 |
84 |
11 |
2 |
7 |
3 |
3 |
2 |
0 |
DC 49 I DT 123 I
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19 |
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2.65 |
3.82 |
76.7 |
-2.25 |
-0.44 |
28.0 |
80 |
17 |
3 |
3 |
2 |
2 |
2 |
0 |
DG 39 I DA 110 I DA 111 I DT 112 I DA 113 I DC
114 I DA 115 I DT 178 J DT 180 J
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20 |
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2.26 |
2.35 |
77.2 |
-2.04 |
-0.46 |
23.6 |
84 |
13 |
3 |
7 |
5 |
3 |
2 |
0 |
DC 49 I DT 123 I
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21 |
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2.60 |
3.71 |
80.4 |
-2.32 |
-0.39 |
29.2 |
77 |
14 |
2 |
2 |
2 |
2 |
2 |
0 |
DG 40 I DA 42 I DA 43 I DA 174 J DA 175 J DA 248
J DG 249 J DT 250 J
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22 |
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2.31 |
2.45 |
81.5 |
-1.90 |
-0.27 |
21.3 |
85 |
11 |
4 |
12 |
4 |
5 |
3 |
0 |
DG 18 I DC 49 I DA 102 I DT 123 I DC 195 J
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23 |
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2.62 |
3.55 |
91.6 |
-2.23 |
-0.44 |
28.5 |
79 |
16 |
3 |
2 |
4 |
2 |
2 |
0 |
DG 40 I DA 42 I DA 43 I DA 174 J DA 175 J DA 248
J DG 249 J DT 250 J
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24 |
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2.64 |
3.49 |
100.7 |
-2.21 |
-0.41 |
27.4 |
81 |
19 |
4 |
3 |
5 |
3 |
2 |
0 |
DG 39 I DA 110 I DA 111 I DT 112 I DA 113 I DC
114 I DA 115 I DT 178 J DT 180 J
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25 |
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2.60 |
3.19 |
102.8 |
-2.00 |
-0.56 |
23.4 |
85 |
15 |
3 |
5 |
2 |
2 |
0 |
0 |
DG 18 I DA 29 I DT 38 I DG 39 I DA 102 I DA 110 I
DA 111 I DT 112 I DA 113 I DC 114 I DA 115 I DT
178 J DT 180 J DT 184 J DG 185 J DC 195 J DA 259 J
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26 |
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2.88 |
2.99 |
103.7 |
-2.31 |
-0.53 |
28.4 |
84 |
13 |
5 |
7 |
3 |
2 |
1 |
0 |
DG 18 I DA 102 I DA 188 J DT 191 J DC 195 J
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27 |
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2.78 |
3.30 |
108.1 |
-2.04 |
-0.65 |
24.3 |
85 |
15 |
3 |
6 |
1 |
1 |
0 |
0 |
DG 18 I DA 29 I DG 39 I DG 40 I DA 42 I DA 43 I D
A 102 I DA 113 I DC 114 I DA 174 J DA 175 J DT
184 J DG 185 J DC 195 J DA 248 J DG 249 J DT 250
J DA 259 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program