PDBsum entry 1oy1 Go to PDB code:  Pore analysis for: 1oy1 calculated with MOLE 2.0 PDB id 1oy1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.30 2.33 36.7 -1.01 -0.54 11.2 86 2 4 4 3 2 0 0  MSE 4 B 2 1.96 1.96 38.9 -0.38 -0.16 12.2 87 3 2 3 4 2 0 0   3 2.29 2.32 40.0 -1.44 -0.69 14.3 90 1 5 4 4 0 0 0  MSE 4 B MSE 60 C 4 1.97 1.98 48.3 -1.14 -0.55 16.8 90 3 3 4 6 0 1 0  MSE 60 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.