PDBsum entry 1oxx Go to PDB code:  Tunnel analysis for: 1oxx calculated with MOLE 2.0 PDB id 1oxx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.75 15.5 -0.31 -0.16 11.5 84 2 0 0 4 0 1 0   2 1.17 1.46 17.8 -0.36 -0.12 11.3 80 2 0 0 5 0 1 0   3 1.56 1.56 18.1 -1.19 -0.31 14.0 68 2 0 0 2 1 1 0  IOD 1923 K 4 1.10 1.63 34.9 1.40 0.23 1.4 78 0 0 4 12 0 1 0  IOD 1914 K 5 1.15 1.55 35.0 1.33 0.29 5.3 79 1 0 3 13 0 1 0  IOD 1914 K IOD 1929 K Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.