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PDBsum entry 1opj
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Pore analysis for: 1opj calculated with MOLE 2.0
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PDB id
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1opj
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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0 pores,
coloured by radius |
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15 pores,
coloured by radius
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15 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.59 |
1.59 |
26.4 |
1.07 |
0.37 |
7.8 |
70 |
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2 |
1 |
0 |
5 |
3 |
0 |
0 |
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STI 3 A
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2 |
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1.45 |
1.45 |
26.4 |
0.80 |
0.30 |
13.0 |
72 |
2 |
2 |
0 |
5 |
2 |
0 |
0 |
STI 4 B
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3 |
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1.39 |
1.45 |
39.3 |
-0.98 |
-0.19 |
21.9 |
79 |
4 |
6 |
1 |
5 |
1 |
0 |
0 |
STI 3 A
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4 |
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2.13 |
2.16 |
40.4 |
0.06 |
0.11 |
15.0 |
78 |
3 |
5 |
1 |
7 |
3 |
0 |
0 |
STI 4 B
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5 |
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1.38 |
1.45 |
40.6 |
0.68 |
0.31 |
7.9 |
73 |
3 |
3 |
0 |
8 |
4 |
0 |
0 |
STI 3 A
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6 |
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2.07 |
2.08 |
40.7 |
-0.06 |
-0.02 |
16.6 |
79 |
3 |
4 |
1 |
7 |
3 |
0 |
0 |
STI 3 A
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7 |
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1.47 |
1.64 |
41.0 |
0.22 |
-0.08 |
8.9 |
82 |
1 |
4 |
7 |
7 |
2 |
0 |
0 |
STI 4 B
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8 |
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1.41 |
1.69 |
42.0 |
-0.65 |
-0.31 |
17.0 |
83 |
5 |
3 |
4 |
7 |
0 |
0 |
0 |
STI 3 A
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9 |
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1.42 |
1.70 |
44.4 |
-0.74 |
-0.36 |
17.7 |
80 |
5 |
4 |
3 |
8 |
0 |
0 |
0 |
STI 3 A
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10 |
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1.48 |
1.64 |
47.7 |
-0.42 |
-0.05 |
13.5 |
74 |
3 |
5 |
4 |
6 |
5 |
0 |
0 |
STI 4 B
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11 |
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1.45 |
1.67 |
56.3 |
-1.07 |
-0.20 |
22.9 |
76 |
5 |
6 |
2 |
6 |
4 |
0 |
0 |
STI 4 B
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12 |
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1.46 |
1.68 |
60.8 |
-0.50 |
-0.24 |
18.0 |
85 |
3 |
5 |
6 |
7 |
1 |
0 |
0 |
STI 4 B
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13 |
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1.45 |
1.75 |
86.6 |
-0.46 |
-0.24 |
13.5 |
80 |
4 |
8 |
7 |
11 |
3 |
0 |
0 |
STI 3 A
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14 |
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1.43 |
1.69 |
87.7 |
0.18 |
0.11 |
8.7 |
75 |
6 |
5 |
5 |
17 |
7 |
2 |
0 |
STI 3 A
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15 |
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1.48 |
1.69 |
98.6 |
-0.60 |
-0.25 |
13.1 |
77 |
3 |
8 |
5 |
9 |
5 |
0 |
0 |
STI 3 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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