PDBsum entry 1om3 Go to PDB code:  Tunnel analysis for: 1om3 calculated with MOLE 2.0 PDB id 1om3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 3.12 24.9 -1.07 -0.71 6.9 97 1 1 7 2 1 0 0   2 1.46 1.58 26.8 -1.10 -0.72 6.5 98 1 1 8 2 1 0 0   3 1.78 3.10 28.5 -0.80 -0.66 2.4 94 0 0 6 2 1 2 0   4 1.47 1.60 30.4 -0.87 -0.67 2.4 95 0 0 7 2 1 2 0   5 1.77 3.10 39.6 -1.03 -0.70 8.7 94 3 3 11 4 1 0 0   6 1.67 1.76 41.5 -1.07 -0.71 9.1 95 3 3 12 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.