PDBsum entry 1okx Go to PDB code:  Tunnel analysis for: 1okx calculated with MOLE 2.0 PDB id 1okx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.21 27.1 -0.63 -0.37 6.2 80 2 0 8 5 0 0 1  SUJ 1261 D CNT 1262 D 2 1.11 1.11 27.1 -0.63 -0.56 4.4 91 2 0 5 3 1 0 1  SUJ 1261 D CNT 1262 D 3 1.43 1.43 28.5 -0.81 -0.49 5.3 78 2 0 8 6 0 0 1  CNT 1262 C SUJ 1261 D CNT 1262 D 4 1.22 1.30 30.0 -1.15 -0.52 8.7 85 3 0 5 4 0 0 1  SUJ 1261 D CNT 1262 D 5 1.49 1.84 35.4 -0.45 -0.47 9.2 93 3 2 4 9 0 0 1  CNT 1262 C 1BO 1256 D SUJ 1261 D CNT 1262 D 6 1.49 1.84 38.6 -0.98 -0.57 4.2 86 2 0 6 6 1 0 1  SUJ 1261 C CNT 1262 C SUJ 1261 D CNT 1262 D 7 1.29 1.28 40.2 -0.70 -0.41 5.7 83 3 0 6 5 0 0 1  CNT 1262 C SUJ 1261 D CNT 1262 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.