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PDBsum entry 1okm

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Cleft analysis for: 1okm PDB id
1okm
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1725.89 1.57 60.98 7 12.40 1 10.92 1 6 4 3 2 4 6 0  
2 1101.94 0.00 71.18 2 9.82 4 8.10 5 6 3 7 10 5 2 0 SAB 555[A] (18 atoms)
3 895.22 0.00 62.25 6 9.99 3 9.65 2 6 3 6 6 1 3 0  
4 861.47 0.00 55.98 9 6.09 8 7.08 7 3 2 2 5 1 5 0  
5 611.30 0.00 60.31 8 5.31 9 9.12 3 4 1 2 3 5 1 0  
6 469.97 0.00 76.39 1 7.58 7 7.15 6 5 2 2 2 1 4 0  
7 477.98 0.00 68.25 3 8.74 6 6.52 9 3 2 4 2 2 3 0  
8 378.00 0.00 66.18 4 12.08 2 8.96 4 1 2 5 1 2 0 0  
9 304.59 0.00 54.95 10 4.80 10 5.97 10 2 2 2 2 0 2 0  
10 362.81 0.00 63.74 5 8.78 5 6.70 8 1 3 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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