PDBsum entry 1okk Go to PDB code:  Tunnel analysis for: 1okk calculated with MOLE 2.0 PDB id 1okk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.79 28.9 -2.28 -0.66 25.7 82 3 3 3 2 1 1 0  GCP 1001 A MG 1002 A GCP 1001 D 2 1.21 2.40 33.8 0.09 -0.10 15.2 83 1 6 2 8 0 0 0  GCP 1001 D 3 1.45 1.83 34.2 -1.52 -0.58 18.6 83 4 4 2 3 1 0 0  GCP 1001 A MG 1002 A 4 1.46 1.76 34.4 -2.01 -0.67 21.5 85 5 4 3 3 1 0 0  GCP 1001 A MG 1002 A 5 1.24 2.31 61.0 -0.45 -0.24 14.1 81 5 5 4 9 1 0 0  GCP 1001 A GCP 1001 D 6 1.26 2.37 61.4 -0.73 -0.31 15.6 83 6 5 5 9 1 0 0  GCP 1001 A GCP 1001 D 7 1.20 3.58 29.9 1.36 0.23 7.3 80 1 2 1 11 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.