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PDBsum entry 1ohh

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ohh calculated with MOLE 2.0 PDB id
1ohh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.47 1.46 28.1 -1.06 -0.18 22.8 85 4 4 1 5 0 0 0  
2 1.41 1.42 35.0 -1.26 -0.53 21.0 82 2 7 2 9 0 0 0  
3 1.29 1.45 15.6 -1.16 -0.27 12.8 85 2 1 2 1 1 0 0  
4 1.29 1.46 16.9 -1.22 -0.30 11.1 78 1 2 2 1 1 1 0  
5 1.30 1.46 17.2 -1.36 -0.28 16.4 85 2 2 2 1 1 0 0  
6 1.18 2.25 18.7 1.92 0.83 5.6 87 1 0 2 7 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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