PDBsum entry 1ofh Go to PDB code:  Tunnel analysis for: 1ofh calculated with MOLE 2.0 PDB id 1ofh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 3.05 31.3 -2.83 -0.58 35.7 82 8 3 0 0 0 1 0   2 1.34 2.98 35.8 -0.63 -0.06 20.9 88 4 3 0 5 0 1 0  ADP 450 B 3 1.34 1.43 68.6 -2.11 -0.56 23.0 82 8 7 3 4 2 3 0  ADP 450 B MG 451 B PO4 452 B MG 453 B 4 1.33 3.12 76.1 -2.30 -0.57 31.1 82 11 13 2 5 1 2 0  ADP 450 B MG 451 B PO4 452 B MG 453 B 5 1.34 2.93 78.3 -1.92 -0.54 27.8 86 8 10 1 6 0 2 0  ADP 450 B MG 451 B PO4 452 B MG 453 B 6 1.34 1.44 80.8 -2.21 -0.57 28.7 85 11 10 3 5 0 3 0  ADP 450 B MG 451 B PO4 452 B MG 453 B 7 1.28 1.31 17.6 -0.01 -0.03 15.5 91 3 1 1 4 0 0 0  ADP 450 A 8 1.27 1.62 18.0 1.46 0.28 5.8 92 0 2 0 5 0 0 0  ADP 450 A 9 1.28 1.33 19.8 -0.61 -0.33 17.6 95 2 1 0 4 0 0 0  ADP 450 A MG 451 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.