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PDBsum entry 1od0

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Top Page protein Protein-protein interface(s) clefts links
Cleft analysis for: 1od0 PDB id
1od0
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 8069.62 1.46 62.02 5 11.14 1 17.07 2 16 12 23 24 15 14 0  
2 5541.33 0.00 65.69 2 9.71 3 18.55 1 16 15 15 27 22 13 0  
3 743.34 0.00 63.61 4 6.93 7 7.08 8 4 5 2 2 5 3 0  
4 523.55 0.00 53.16 10 10.56 2 9.45 3 3 1 1 4 1 1 0  
5 456.05 0.00 53.56 9 6.01 10 7.41 7 3 2 1 1 2 1 0  
6 773.30 0.00 56.62 6 6.46 8 6.33 10 3 4 5 4 4 1 0  
7 378.00 0.00 70.85 1 9.00 4 7.98 4 2 1 0 4 3 0 0  
8 550.55 0.00 56.21 7 7.23 6 7.81 5 3 3 1 4 2 1 0  
9 705.80 0.00 55.70 8 6.29 9 7.72 6 5 2 4 4 2 0 0  
10 390.66 0.00 64.37 3 7.96 5 6.42 9 2 2 2 2 3 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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