spacer
spacer

PDBsum entry 1o8a

Go to PDB code: 
Top Page protein ligands metals clefts links
Cleft analysis for: 1o8a PDB id
1o8a
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 9563.91 5.07 80.51 1 16.17 1 24.79 1 24 21 43 44 27 13 3 ACT 700[A], NXA 702[A] (13 atoms)
2 1887.89 0.00 68.16 2 12.47 2 9.57 2 9 4 8 7 5 3 1  
3 1047.09 0.00 58.18 7 6.72 8 8.42 4 2 4 7 5 0 0 0  
4 1128.52 0.00 64.05 3 7.37 5 7.28 7 2 4 9 5 1 5 0 NAG 696[A] (2 atoms)
5 1085.48 0.00 63.23 4 10.36 3 7.29 6 3 2 7 3 2 5 1  
6 733.64 0.00 59.84 6 5.75 9 7.28 8 3 3 2 4 2 2 0  
7 710.86 0.00 57.93 8 7.35 6 8.22 5 4 2 1 5 3 2 0  
8 450.56 0.00 55.36 9 8.05 4 8.58 3 1 3 2 2 1 1 0  
9 701.16 0.00 60.10 5 4.83 10 6.59 9 4 3 5 4 0 2 0 NAG 693[A] (3 atoms)
10 672.89 0.00 55.23 10 7.23 7 6.39 10 2 2 2 4 1 6 1  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer