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PDBsum entry 1o4z
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Tunnel analysis for: 1o4z calculated with  MOLE 2.0
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PDB id
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1o4z
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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11 tunnels,
coloured by tunnel radius |
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17 tunnels,
coloured by
tunnel radius
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17 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
1.44 |
26.1 |
-1.52 |
-0.13 |
14.5 |
73 |
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1 |
4 |
1 |
1 |
2 |
3 |
0 |
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2 |
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1.33 |
1.33 |
26.8 |
-1.59 |
-0.03 |
11.5 |
72 |
1 |
3 |
2 |
1 |
3 |
3 |
0 |
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3 |
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1.28 |
1.44 |
27.8 |
-1.59 |
-0.08 |
14.2 |
71 |
1 |
3 |
1 |
1 |
2 |
3 |
0 |
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4 |
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1.32 |
1.32 |
28.9 |
-1.82 |
-0.09 |
14.8 |
77 |
2 |
3 |
3 |
1 |
3 |
3 |
0 |
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5 |
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1.33 |
1.33 |
30.8 |
-2.24 |
-0.11 |
18.6 |
70 |
2 |
3 |
2 |
1 |
4 |
5 |
0 |
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6 |
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1.18 |
1.44 |
24.8 |
-1.54 |
-0.25 |
13.1 |
81 |
1 |
4 |
2 |
1 |
1 |
3 |
0 |
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7 |
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1.20 |
1.44 |
25.5 |
-1.59 |
-0.17 |
12.2 |
81 |
1 |
3 |
2 |
1 |
1 |
3 |
0 |
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8 |
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1.19 |
1.45 |
26.3 |
-1.55 |
-0.14 |
10.4 |
74 |
1 |
3 |
1 |
0 |
2 |
3 |
0 |
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9 |
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1.19 |
1.41 |
30.0 |
-1.77 |
-0.21 |
14.7 |
83 |
2 |
3 |
3 |
1 |
1 |
4 |
0 |
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10 |
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1.72 |
1.90 |
21.2 |
-2.05 |
-0.20 |
29.9 |
70 |
2 |
6 |
1 |
0 |
4 |
1 |
0 |
EPE 2004 B
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11 |
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1.69 |
1.87 |
27.1 |
-2.89 |
-0.36 |
32.4 |
68 |
2 |
6 |
2 |
0 |
3 |
0 |
0 |
EPE 2004 B
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12 |
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1.70 |
1.88 |
28.6 |
-2.37 |
-0.33 |
29.0 |
73 |
2 |
6 |
1 |
1 |
3 |
1 |
0 |
EPE 2004 B
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13 |
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1.74 |
1.93 |
18.0 |
-2.67 |
-0.51 |
30.6 |
71 |
1 |
6 |
1 |
0 |
3 |
1 |
0 |
EPE 2002 A
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14 |
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1.83 |
2.18 |
18.1 |
-2.11 |
-0.23 |
28.9 |
70 |
1 |
6 |
1 |
0 |
4 |
1 |
0 |
EPE 2003 D
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15 |
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1.83 |
2.23 |
21.3 |
-2.47 |
-0.37 |
29.5 |
73 |
2 |
6 |
1 |
1 |
3 |
1 |
0 |
EPE 2003 D
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16 |
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1.72 |
1.90 |
19.7 |
-2.14 |
-0.29 |
30.0 |
70 |
1 |
6 |
1 |
0 |
4 |
1 |
0 |
EPE 2001 C
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17 |
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1.70 |
1.89 |
22.4 |
-2.50 |
-0.46 |
28.1 |
73 |
2 |
6 |
1 |
1 |
3 |
1 |
0 |
EPE 2001 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program