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PDBsum entry 1o3s
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Tunnel analysis for: 1o3s calculated with  MOLE 2.0
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PDB id
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1o3s
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.04 |
2.60 |
15.2 |
-1.06 |
-0.03 |
8.9 |
85 |
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2 |
0 |
4 |
4 |
1 |
1 |
0 |
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2 |
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1.34 |
1.34 |
15.5 |
-0.62 |
-0.78 |
6.3 |
72 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
DA 1 B DA 2 B DA 3 B DT -2 C DT -1 C DT 1 C
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3 |
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1.34 |
1.34 |
16.9 |
-1.20 |
-0.73 |
13.2 |
78 |
4 |
1 |
0 |
0 |
0 |
0 |
0 |
DA 3 B DT -2 C DT -1 C DT 1 C
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4 |
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1.13 |
1.26 |
18.8 |
-1.23 |
-0.67 |
14.9 |
85 |
3 |
1 |
0 |
0 |
0 |
0 |
0 |
DT 4 B DG 5 B DC 6 B DT 1 C DT 2 C
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5 |
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1.41 |
1.41 |
19.8 |
-0.83 |
-0.72 |
9.5 |
81 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
DA 3 B DT 4 B DG 5 B DC 6 B DT -1 C DT 1 C DT 2 C
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6 |
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1.34 |
1.34 |
23.3 |
-2.18 |
-0.75 |
23.7 |
82 |
3 |
2 |
2 |
0 |
0 |
0 |
0 |
DA 2 B DA 3 B DT -1 C DT 1 C
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7 |
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1.81 |
2.12 |
28.5 |
-0.07 |
0.05 |
10.3 |
86 |
2 |
0 |
4 |
7 |
1 |
0 |
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CMP 1 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program