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PDBsum entry 1nya
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Tunnel analysis for: 1nya calculated with  MOLE 2.0
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PDB id
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1nya
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.14 |
1.39 |
21.8 |
1.42 |
0.50 |
5.4 |
71 |
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1 |
1 |
0 |
9 |
2 |
1 |
0 |
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2 |
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1.15 |
1.41 |
26.1 |
0.77 |
0.26 |
12.8 |
74 |
0 |
3 |
0 |
8 |
2 |
0 |
0 |
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3 |
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1.26 |
4.26 |
29.1 |
1.19 |
0.70 |
10.0 |
66 |
4 |
1 |
0 |
8 |
3 |
0 |
0 |
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4 |
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1.28 |
4.28 |
39.0 |
1.88 |
0.74 |
8.3 |
68 |
3 |
0 |
1 |
11 |
4 |
0 |
0 |
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5 |
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1.26 |
4.25 |
40.8 |
1.18 |
0.44 |
7.7 |
72 |
2 |
1 |
2 |
9 |
4 |
0 |
0 |
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6 |
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1.12 |
1.86 |
51.1 |
2.20 |
0.82 |
6.2 |
72 |
3 |
1 |
1 |
16 |
5 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program