PDBsum entry 1ny6 Go to PDB code:  Pore analysis for: 1ny6 calculated with MOLE 2.0 PDB id 1ny6 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 1.55 33.3 -0.70 -0.22 15.4 73 4 1 0 3 2 0 0   2 3.35 4.20 38.2 -2.56 -0.66 27.6 80 5 6 3 0 1 1 0   3 1.58 1.93 56.6 -2.50 -0.43 29.8 78 8 7 2 3 1 0 0  ADP 4 F 4 1.22 1.41 61.8 -2.66 -0.71 33.1 80 8 12 4 3 1 1 0   5 1.21 1.41 72.1 -2.73 -0.67 29.3 80 8 12 6 3 2 1 0   6 1.13 1.44 76.3 -2.94 -0.70 37.3 80 12 10 3 1 1 0 0  ADP 3 E 7 1.73 1.73 80.2 -1.04 -0.56 17.2 80 3 5 0 3 2 1 0   8 1.53 3.27 95.0 -1.78 -0.46 26.9 79 10 10 2 7 2 2 0  ADP 7 B 9 1.52 2.65 96.5 -2.55 -0.56 30.4 79 12 11 3 2 3 0 0  ADP 5 G 10 2.27 3.85 112.2 -2.88 -0.67 38.3 81 15 19 6 3 0 0 0  ADP 13 N 11 1.77 1.77 112.1 -1.70 -0.62 23.0 81 6 12 3 3 2 2 0   12 1.99 3.46 118.4 -2.55 -0.68 31.8 77 15 15 3 2 2 1 1  ADP 14 H 13 1.69 3.39 119.6 -2.67 -0.64 31.5 81 17 17 8 4 3 0 1  ADP 7 B 14 1.48 3.22 119.3 -2.21 -0.55 29.2 81 18 14 5 6 1 1 0  ADP 7 B ADP 1 C 15 1.84 2.95 128.5 -0.92 -0.20 16.8 75 6 7 0 8 7 1 0   16 1.53 3.28 139.7 -2.25 -0.47 28.0 77 14 14 4 3 5 1 0  ADP 7 B 17 1.68 2.61 143.3 -1.56 -0.48 23.6 81 10 12 2 6 4 2 0  ADP 5 G 18 1.74 3.21 146.0 -1.74 -0.59 24.1 83 10 15 3 4 2 0 0  ADP 1 C 19 1.68 2.47 148.8 -2.25 -0.59 31.5 80 13 17 3 3 1 1 0  ADP 1 C 20 1.26 1.71 153.5 -1.37 0.03 19.8 71 13 8 4 9 9 2 0   21 1.67 2.51 161.3 -2.51 -0.65 32.4 80 15 23 6 3 1 2 0  ADP 1 C 22 1.66 3.36 162.6 -2.38 -0.57 32.3 79 16 22 5 5 2 3 0  ADP 7 B 23 1.62 3.30 171.0 -2.77 -0.68 32.3 80 24 22 10 4 2 1 1  ADP 1 C 24 1.26 1.71 172.7 -2.02 -0.29 29.0 76 17 21 5 8 6 1 0   25 1.70 3.27 185.1 -2.40 -0.58 32.1 81 17 22 8 6 3 1 0  ADP 13 N 26 1.76 3.38 198.4 -1.83 -0.30 28.0 76 17 18 3 10 7 2 0  ADP 7 B 27 1.54 3.24 213.2 -2.15 -0.48 31.2 80 21 23 4 8 4 3 0  ADP 7 B ADP 5 G 28 1.71 3.34 217.9 -2.20 -0.56 29.4 79 20 24 8 8 5 2 0  ADP 7 B ADP 13 N 29 1.25 1.26 231.9 -1.75 -0.26 25.6 76 16 23 6 11 9 2 0   30 1.76 2.41 256.1 -2.30 -0.59 30.0 79 24 28 9 8 4 2 0  ADP 1 C ADP 13 N Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.