PDBsum entry 1nux

Tunnel analysis for: 1nux calculated with

MOLE 2.0

PDB id

1nux

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

3 tunnels, coloured by tunnel radius

5 tunnels, coloured by tunnel radius

5 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.81

1.94

16.2

-0.68

-0.22

12.5

78

1

2

4

3

3

2

0

F6P 2339 A

2

1.82

1.93

17.1

-0.62

0.33

8.3

73

1

1

3

3

4

1

0

F6P 2339 A

3

1.32

3.57

18.4

-1.66

0.00

11.5

74

3

0

3

1

3

2

0

4

1.11

2.12

16.1

-0.08

0.05

9.3

77

1

2

2

5

2

1

0

5

1.10

2.10

20.2

0.55

0.26

9.5

83

1

2

3

8

2

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.