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PDBsum entry 1nub
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Pore analysis for: 1nub calculated with  MOLE 2.0
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PDB id
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1nub
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.30 |
1.69 |
36.2 |
-1.32 |
-0.26 |
19.2 |
83 |
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3 |
2 |
3 |
2 |
2 |
1 |
0 |
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NAG 1 C
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2 |
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1.59 |
1.96 |
60.1 |
-0.20 |
0.30 |
9.4 |
74 |
4 |
1 |
3 |
8 |
5 |
3 |
0 |
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3 |
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1.60 |
1.64 |
47.7 |
-1.08 |
-0.26 |
20.4 |
84 |
5 |
3 |
2 |
1 |
0 |
2 |
0 |
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4 |
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1.18 |
1.84 |
26.0 |
-2.03 |
-0.44 |
26.1 |
84 |
4 |
4 |
1 |
1 |
0 |
2 |
0 |
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5 |
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1.21 |
1.27 |
27.6 |
-1.43 |
-0.54 |
16.0 |
84 |
3 |
4 |
2 |
2 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program