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PDBsum entry 1nsd

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1nsd PDB id
1nsd
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6270.75 2.75 63.08 3 10.11 1 12.53 1 28 12 11 14 12 12 4  
2 2283.19 0.00 66.04 2 7.79 8 12.30 2 11 11 10 9 3 7 0 DAN 467[B] (20 atoms)
3 1852.45 0.00 57.39 10 6.80 10 11.11 3 7 5 6 9 3 7 0  
4 1571.48 0.00 60.16 9 9.01 5 8.16 5 8 4 4 5 4 5 0  
5 1096.88 0.00 70.54 1 8.21 6 9.87 4 9 6 6 2 3 1 0 DAN 467[A] (20 atoms)
6 1154.25 0.00 60.49 8 9.34 3 7.32 8 6 4 8 7 2 3 0 NAG 466[A] (7 atoms)
7 1087.59 0.00 61.03 6 9.05 4 6.83 10 6 3 8 7 2 4 0 NAG 466[B] (4 atoms)
8 1088.44 0.00 61.93 4 9.95 2 7.97 6 3 2 6 7 1 4 0  
9 854.30 0.00 60.98 7 8.17 7 7.38 7 3 2 6 2 3 2 0  
10 698.20 0.00 61.33 5 6.93 9 6.97 9 1 1 5 5 3 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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