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PDBsum entry 1nqx
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Tunnel analysis for: 1nqx calculated with  MOLE 2.0
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PDB id
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1nqx
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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13 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.46 |
1.45 |
20.3 |
-0.20 |
-0.17 |
6.5 |
79 |
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1 |
2 |
3 |
4 |
1 |
2 |
0 |
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2 |
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1.22 |
1.33 |
15.4 |
-1.73 |
-0.22 |
26.8 |
85 |
4 |
1 |
1 |
2 |
1 |
0 |
0 |
RLP 3201 C PO4 3251 C
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3 |
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1.57 |
1.60 |
18.7 |
0.74 |
0.31 |
9.7 |
88 |
3 |
0 |
2 |
2 |
1 |
0 |
0 |
RLP 3201 C PO4 3251 C
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4 |
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1.21 |
1.34 |
15.8 |
-1.79 |
-0.15 |
28.4 |
85 |
4 |
1 |
1 |
2 |
1 |
0 |
0 |
RLP 4201 D PO4 4251 D
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5 |
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1.21 |
1.34 |
19.5 |
-1.75 |
-0.22 |
25.2 |
90 |
3 |
0 |
1 |
3 |
1 |
0 |
0 |
RLP 4201 D PO4 4251 D
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6 |
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2.75 |
5.88 |
17.0 |
-2.90 |
-0.82 |
36.4 |
88 |
5 |
9 |
5 |
0 |
0 |
0 |
0 |
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7 |
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1.28 |
1.68 |
15.1 |
-1.65 |
-0.03 |
30.8 |
86 |
4 |
1 |
0 |
2 |
1 |
0 |
0 |
RLP 1201 A PO4 1251 A
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8 |
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1.28 |
1.68 |
19.1 |
-1.06 |
-0.02 |
20.7 |
88 |
3 |
0 |
1 |
4 |
1 |
0 |
0 |
RLP 1201 A PO4 1251 A
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9 |
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1.58 |
1.72 |
18.8 |
0.62 |
0.29 |
10.6 |
88 |
3 |
0 |
2 |
2 |
1 |
0 |
0 |
RLP 5201 E PO4 5251 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program