PDBsum entry 1nq5 Go to PDB code:  Pore analysis for: 1nq5 calculated with MOLE 2.0 PDB id 1nq5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.15 3.16 27.2 -0.83 -0.51 16.6 84 4 4 1 5 1 0 0   2 1.40 3.33 27.6 -1.85 -0.67 17.8 84 2 2 2 0 1 1 0   3 2.94 2.95 29.2 -0.79 -0.38 18.1 82 4 5 1 6 0 0 0   4 4.66 4.86 29.6 -2.01 -0.72 25.3 82 3 6 0 2 0 1 0   5 1.49 1.49 36.5 -1.67 -0.65 14.9 84 5 4 2 2 0 2 0   6 2.95 2.95 38.4 -0.61 -0.34 11.0 89 3 2 2 6 0 1 0  NAD 7336 C SO4 7338 C 7 2.11 2.39 40.1 -1.08 -0.38 17.1 86 5 1 1 4 0 1 0  NAD 5336 A SO4 5338 A 8 2.31 2.44 40.9 -1.32 -0.43 17.7 87 4 5 4 5 1 1 0   9 2.92 3.02 41.5 -1.10 -0.56 16.8 88 2 3 1 4 0 1 0   10 3.45 3.45 42.6 -2.07 -0.65 25.5 80 4 6 0 3 0 1 0   11 3.13 3.64 43.8 -2.33 -0.67 25.6 81 3 5 2 1 1 1 0   12 1.37 3.28 47.6 -1.93 -0.65 20.6 81 5 5 1 2 1 2 0   13 1.48 1.48 54.9 -1.23 -0.60 12.2 85 5 3 4 4 2 2 0   14 1.40 1.66 68.7 -1.70 -0.70 18.3 87 5 4 4 1 1 1 0   15 1.49 1.50 78.5 -1.73 -0.65 17.6 84 7 6 6 2 2 2 0   16 3.11 3.69 78.8 -1.77 -0.62 20.6 83 8 9 3 4 1 2 0   17 1.48 2.03 128.7 -1.11 -0.54 19.0 81 6 7 1 8 0 0 0   18 1.44 2.83 139.6 -1.15 -0.58 17.7 82 4 5 1 7 0 1 0   19 1.42 2.86 143.3 -1.26 -0.49 18.2 83 7 8 4 8 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.