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PDBsum entry 1nk0

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Top Page protein dna_rna ligands pores links
Pore analysis for: 1nk0 calculated with MOLE 2.0 PDB id
1nk0
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.90 2.04 31.1 -1.40 -0.71 21.7 79 2 3 1 1 0 1 1  
2 1.12 1.49 48.5 -1.14 -0.60 8.3 82 3 1 2 1 1 2 0  DC 20 B DT 23 B DC 24 B DA 25 B DG 26 B DT 8 C DG
9 C DA 10 C DT 11 C DC 12 C DG 13 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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